Cell fitness screens reveal a conflict between LINE-1 retrotransposition and DNA replication

细胞适应性筛选揭示了LINE-1逆转录转座与DNA复制之间的冲突

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作者:Daniel Ardeljan,Jared P Steranka,Chunhong Liu,Zhi Li,Martin S Taylor,Lindsay M Payer,Mikhail Gorbounov,Jacob S Sarnecki,Vikram Deshpande,Ralph H Hruban,Jef D Boeke,David Fenyö,Pei-Hsun Wu,Agata Smogorzewska,Andrew J Holland,Kathleen H Burns

Abstract

LINE-1 retrotransposon overexpression is a hallmark of human cancers. We identified a colorectal cancer wherein a fast-growing tumor subclone downregulated LINE-1, prompting us to examine how LINE-1 expression affects cell growth. We find that nontransformed cells undergo a TP53-dependent growth arrest and activate interferon signaling in response to LINE-1. TP53 inhibition allows LINE-1+ cells to grow, and genome-wide-knockout screens show that these cells require replication-coupled DNA-repair pathways, replication-stress signaling and replication-fork restart factors. Our findings demonstrate that LINE-1 expression creates specific molecular vulnerabilities and reveal a retrotransposition-replication conflict that may be an important determinant of cancer growth.

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