BET Protein Inhibition Regulates Macrophage Chromatin Accessibility and Microbiota-Dependent Colitis

BET 蛋白抑制调节巨噬细胞染色质可及性和微生物依赖性结肠炎

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作者:Michelle Hoffner O'Connor, Ana Berglind, Meaghan M Kennedy Ng, Benjamin P Keith, Zachary J Lynch, Matthew R Schaner, Erin C Steinbach, Jeremy Herzog, Omar K Trad, William R Jeck, Janelle C Arthur, Jeremy M Simon, R Balfour Sartor, Terrence S Furey, Shehzad Z Sheikh

Conclusion

We identified the mechanism of action associated with a new class of compounds that may mitigate aberrant macrophage responses to bacteria in colitis.

Methods

We performed ATAC-seq and RNA-seq on Il10-/- bone marrow-derived macrophages (BMDMs) cultured in the presence and absence of lipopolysaccharide (LPS) with and without treatment with (+)-JQ1 and evaluated changes in chromatin accessibility and gene expression. Germ-free Il10-/- mice were treated with (+)-JQ1, colonized with fecal slurries and underwent histological and molecular evaluation 14-days post colonization.

Results

Treatment with (+)-JQ1 suppressed LPS-induced changes in chromatin at distal regulatory elements associated with inflammatory genes, particularly in regions that contain motifs for AP-1 and IRF transcription factors. This resulted in attenuation of inflammatory gene expression. Treatment with (+)-JQ1 in vivo resulted in a mild reduction in colitis severity as compared with vehicle-treated mice.

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