Improved quality control processing of peptide-centric LC-MS proteomics data

改进以肽为中心的 LC-MS 蛋白质组学数据的质量控制处理

阅读:10
作者:Melissa M Matzke, Katrina M Waters, Thomas O Metz, Jon M Jacobs, Amy C Sims, Ralph S Baric, Joel G Pounds, Bobbie-Jo M Webb-Robertson

Results

We describe a novel multivariate statistical strategy for the identification of LC-MS runs with extreme peptide abundance distributions. Comparison with current method (run-by-run correlation) demonstrates a significantly better rate of identification of outlier runs by the multivariate strategy. Simulation studies also suggest that this strategy significantly outperforms correlation alone in the identification of statistically extreme liquid chromatography-mass spectrometry (LC-MS) runs. Availability: https://www.biopilot.org/docs/Software/RMD.php Contact: bj@pnl.gov

Supplementary Information

Supplementary material is available at Bioinformatics online.

特别声明

1、本页面内容包含部分的内容是基于公开信息的合理引用;引用内容仅为补充信息,不代表本站立场。

2、若认为本页面引用内容涉及侵权,请及时与本站联系,我们将第一时间处理。

3、其他媒体/个人如需使用本页面原创内容,需注明“来源:[生知库]”并获得授权;使用引用内容的,需自行联系原作者获得许可。

4、投稿及合作请联系:info@biocloudy.com。