Biphenyl amide p38 kinase inhibitors 4: DFG-in and DFG-out binding modes

联苯酰胺 p38 激酶抑制剂 4:DFG-in 和 DFG-out 结合模式

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作者:Richard M Angell, Tony D Angell, Paul Bamborough, Mark J Bamford, Chun-wa Chung, Stuart G Cockerill, Stephen S Flack, Katherine L Jones, Dramane I Laine, Timothy Longstaff, Steve Ludbrook, Rosannah Pearson, Kathryn J Smith, Penny A Smee, Don O Somers, Ann L Walker

Abstract

The biphenyl amides (BPAs) are a series of p38alpha MAP kinase inhibitors. Compounds are able to bind to the kinase in either the DFG-in or DFG-out conformation, depending on substituents. X-ray, binding, kinetic and cellular data are shown, providing the most detailed comparison to date between potent compounds from the same chemical series that bind to different p38alpha conformations. DFG-out-binding compounds could be made more potent than DFG-in-binding compounds by increasing their size. Unexpectedly, compounds that bound to the DGF-out conformation showed diminished selectivity. The kinetics of binding to the isolated enzyme and the effects of compounds on cells were largely unaffected by the kinase conformation bound.

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